Difference between revisions of "XYLITOL"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44. RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-41...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** left-to-right * common-name: ** phosphoenol...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44. RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44.] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** phosphoenolpyruvate carboxykinase (atp)
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.1.1.49 ec-4.1.1.49]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[CPD-4124]][c] '''+''' 1.0 [[DIMETHYL-GLYCINE]][c] '''<=>''' 1.0 [[BETAINE]][c] '''+''' 1.0 [[CPD-4125]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ14668]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
 +
** '''6''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: nb gene associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18618 18618]
−
{{#set: nb pathway associated=0}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
−
{{#set: reconstruction tool=meneco}}
+
* UNIPROT:
−
{{#set: reconstruction comment=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/P10963 P10963]
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
 +
** [http://www.uniprot.org/uniprot/P43923 P43923]
 +
** [http://www.uniprot.org/uniprot/P22259 P22259]
 +
** [http://www.uniprot.org/uniprot/P42066 P42066]
 +
** [http://www.uniprot.org/uniprot/P49292 P49292]
 +
** [http://www.uniprot.org/uniprot/O49547 O49547]
 +
** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
 +
** [http://www.uniprot.org/uniprot/Q39294 Q39294]
 +
** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=phosphoenolpyruvate carboxykinase (atp)}}
 +
{{#set: ec-number=ec-4.1.1.49}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction PEPCARBOXYKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphoenolpyruvate carboxykinase (atp)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-561, superpathway of glyoxylate cycle and fatty acid degradation: PWY-561
    • 6 reactions found over 4 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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