Difference between revisions of "XYLULOKIN-RXN"

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(Created page with "Category:reaction == Reaction RXN-2762 == * direction: ** left-to-right * common-name: ** 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction XYLULOKIN-RXN == * direction: ** left-to-right * common-name: ** xylulokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.17 ec-2.7.1....")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-2762 ==
+
== Reaction XYLULOKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 2-methyl-6-solanyl-1,4-benzoquinone methyltransferase
+
** xylulokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.295 ec-2.1.1.295]
+
** [http://enzyme.expasy.org/EC/2.7.1.17 ec-2.7.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-METHYL-6-SOLANYL-14-BENZOQUINONE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12829]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[D-XYLULOSE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15772]]
+
* Gene: [[SJ07151]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12221]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6978]], plastoquinol-9 biosynthesis II:
+
* [[DARABITOLUTIL-PWY]], D-arabitol degradation:
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-1581]], plastoquinol-9 biosynthesis I:
+
* [[LARABITOLUTIL-PWY]], xylitol degradation:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[XYLCAT-PWY]], D-xylose degradation I:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR105255
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38000 38000]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10965 10965]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01639 R01639]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P27156 P27156]
 +
** [http://www.uniprot.org/uniprot/Q9CFG8 Q9CFG8]
 +
** [http://www.uniprot.org/uniprot/P35850 P35850]
 +
** [http://www.uniprot.org/uniprot/P09099 P09099]
 +
** [http://www.uniprot.org/uniprot/P12867 P12867]
 +
** [http://www.uniprot.org/uniprot/P27155 P27155]
 +
** [http://www.uniprot.org/uniprot/P21939 P21939]
 +
** [http://www.uniprot.org/uniprot/P29444 P29444]
 +
** [http://www.uniprot.org/uniprot/Q9X714 Q9X714]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=2-methyl-6-solanyl-1,4-benzoquinone methyltransferase}}
+
{{#set: common-name=xylulokinase}}
−
{{#set: ec-number=ec-2.1.1.295}}
+
{{#set: ec-number=ec-2.7.1.17}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction XYLULOKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • xylulokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • DARABITOLUTIL-PWY, D-arabitol degradation:
    • 1 reactions found over 2 reactions in the full pathway
  • LARABITOLUTIL-PWY, xylitol degradation:
    • 1 reactions found over 2 reactions in the full pathway
  • XYLCAT-PWY, D-xylose degradation I:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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