Difference between revisions of "XYLULOKIN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction UDP-GLUCURONATE-4-EPIMERASE-RXN == * direction: ** reversible * common-name: ** udp-glucuronate 4-epimerase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction AMINOACYLASE-RXN == * direction: ** left-to-right * common-name: ** aminoacylase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.14 ec-3.5...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UDP-GLUCURONATE-4-EPIMERASE-RXN ==
+
== Reaction AMINOACYLASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-glucuronate 4-epimerase
+
** aminoacylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.1.3.6 ec-5.1.3.6]
+
** [http://enzyme.expasy.org/EC/3.5.1.14 ec-3.5.1.14]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[UDP-GLUCURONATE]][c] '''<=>''' 1 [[UDP-D-GALACTURONATE]][c]
+
* 1 [[N-Acylated-Aliphatic-Amino-Acids]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Aliphatic-L-Amino-Acids]][c] '''+''' 1 [[Carboxylates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ09884]]
−
* Gene: [[SJ01092]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ21981]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10400]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ19982]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04385]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4861]], UDP-&alpha;-D-galacturonate biosynthesis I (from UDP-D-glucuronate):
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6415]], L-ascorbate biosynthesis V:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11407 11407]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15565 15565]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01385 R01385]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01263 R01263]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: common-name=udp-glucuronate 4-epimerase}}
+
** [http://www.uniprot.org/uniprot/Q03154 Q03154]
−
{{#set: ec-number=ec-5.1.3.6}}
+
** [http://www.uniprot.org/uniprot/Q8X8Q0 Q8X8Q0]
−
{{#set: nb gene associated=4}}
+
** [http://www.uniprot.org/uniprot/P72349 P72349]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/P37111 P37111]
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: common-name=aminoacylase}}
 +
{{#set: ec-number=ec-3.5.1.14}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:05, 5 January 2021

Reaction AMINOACYLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • aminoacylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=XYLULOKIN-RXN&oldid=64032"