Curation

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 Common-nameEc-numberReconstruction categoryReconstruction sourceReconstruction commentNb gene associatedNb pathway associated
Biomass rxnManualBiomass reactionForfba00
Exchange BIOMASSManualBiomass reactionExchange biomass to boundary00
ExchangeSeed-ADENOSYLCOBALAMINManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-AMMONIAManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-BIOTINManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CA+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CARBON-DIOXIDEManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CL-ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CO+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-COB-I-ALAMINManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CPD-3ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CPD-315ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CU+ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-CU+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-EDTAManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-FE+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-FE+3ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-K+ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-LightManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-MG+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-MN+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-NA+ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-NITRATEManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-OXYGEN-MOLECULEManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-PROTONManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-SULFATEManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-THIAMINEManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-WATERManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
ExchangeSeed-ZN+2ManualImport from mediumAdded to manage seeds from boundary to extracellular compartment00
New 23 hydroxylationManualReactions creator cokaPathmodel inference01
New 23 reductionManualReactions creator cokaPathmodel inference01
New delta1-2 reductionManualReactions creator cokaPathmodel inference01
New delta24 reductionManualReactions creator cokaPathmodel inference01
RXN-19200Ec-1.23.5ManualCokaTransformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)01
RXN-19202Ec-1.14.13ManualCokaTransformation of diadinoxanthin into diatoxanthin (second cycle of xanthophylls)11
RXN-21829Ec-1.14.18.10ManualReactions add cokaCuration sterols (girard et al.)00
RXN-21830Ec-1.1.1.418ManualReactions add cokaCuration sterols (girard et al.)01
RXN-22198ManualReactions creator cokaGallo202011
RXN-22199ManualReaction creator cokaGallo202001
RXN-22203ManualReaction creator cokaGallo202001
RXN-22204ManualReaction creator cokaGallo202001
RXN-22205ManualReaction creator cokaGallo202001
RXN-22206ManualReactions creator cokaGallo202001
RXN-7978ManualCokaTransformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)11
RXN-8025ManualCokaTransformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)23
RXN-8026ManualCokaTransformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)23
RXN1F-152Ec-1.14.15.qManualCokaTransformation of beta carotene into zeaxanthin (direct)20
Transport BIOMASSManualBiomass reactionTransport biomass to external compartment00
TransportSeed-ADENOSYLCOBALAMINManualImport from mediumAdded to manage seeds from extracellular to cytosol compartment00
TransportSeed-AMMONIAManualImport from mediumAdded to manage seeds from extracellular to cytosol compartment00
... further results