Manual

	Common-name	Ec-number	Reconstruction tool	Reconstruction source	Reconstruction comment	Nb gene associated	Nb pathway associated
Biomass rxn			Curation	Biomass reaction	Forfba	0	0
Exchange BIOMASS			Curation	Biomass reaction	Exchange biomass to boundary	0	0
ExchangeSeed-ADENOSYLCOBALAMIN			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-AMMONIA			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-BIOTIN			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CA+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CARBON-DIOXIDE			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CL-			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CO+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-COB-I-ALAMIN			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CPD-3			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CPD-315			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CU+			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-CU+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-EDTA			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-FE+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-FE+3			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-K+			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-Light			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-MG+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-MN+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-NA+			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-NITRATE			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-OXYGEN-MOLECULE			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-PROTON			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-SULFATE			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-THIAMINE			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-WATER			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
ExchangeSeed-ZN+2			Curation	Import from medium	Added to manage seeds from boundary to extracellular compartment	0	0
New 23 hydroxylation			Curation	Reactions creator coka	Pathmodel inference	0	1
New 23 reduction			Curation	Reactions creator coka	Pathmodel inference	0	1
New delta1-2 reduction			Curation	Reactions creator coka	Pathmodel inference	0	1
New delta24 reduction			Curation	Reactions creator coka	Pathmodel inference	0	1
RXN-19200		Ec-1.23.5	Curation	Coka	Transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)	0	1
RXN-19202		Ec-1.14.13	Curation	Coka	Transformation of diadinoxanthin into diatoxanthin (second cycle of xanthophylls)	1	1
RXN-21829		Ec-1.14.18.10	Curation	Reactions add coka	Curation sterols (girard et al.)	0	0
RXN-21830		Ec-1.1.1.418	Curation	Reactions add coka	Curation sterols (girard et al.)	0	1
RXN-22198			Curation	Reactions creator coka	Gallo2020	1	1
RXN-22199			Curation	Reaction creator coka	Gallo2020	0	1
RXN-22203			Curation	Reaction creator coka	Gallo2020	0	1
RXN-22204			Curation	Reaction creator coka	Gallo2020	0	1
RXN-22205			Curation	Reaction creator coka	Gallo2020	0	1
RXN-22206			Curation	Reactions creator coka	Gallo2020	0	1
RXN-7978			Curation	Coka	Transformation of zeaxanthin into antheraxanthin (first cycle of xanthophylls)	1	1
RXN-7979			Curation	Coka	Transformation of antheraxanthin into violaxanthin (first cycle of xanthophylls)	1	2
RXN-8025			Curation	Coka	Transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)	2	3
RXN-8026			Curation	Coka	Transformation of beta carotene into zeaxanthin (with beta cryptoxanthin as an intermediate)	2	3
RXN1F-152		Ec-1.14.15.q	Curation	Coka	Transformation of beta carotene into zeaxanthin (direct)	2	0
Transport BIOMASS			Curation	Biomass reaction	Transport biomass to external compartment	0	0
TransportSeed-ADENOSYLCOBALAMIN			Curation	Import from medium	Added to manage seeds from extracellular to cytosol compartment	0	0
... further results