Semantic search

This page or action requires Javascript to work, please enable Javascript in your browser or use a browser where this is supported so that functionality can be served and is provided as requested. For further assistance, please have a look at the noscript help page.

Options | Search Clear all entries |

Condition

Printout selection

Options

Parameters [+]

limit:

The maximum number of results to return

offset:

The offset of the first result

link:

Show values as links

headers:

Display the headers/property names

mainlabel:

The label to give to the main page name

intro:

The text to display before the query results, if there are any

outro:

The text to display after the query results, if there are any

searchlabel:

Text for continuing the search

default:

The text to display if there are no query results

class:

An additional CSS class to set for the table

transpose:

Display table headers vertically and results horizontally

sep:

The separator between results

Sort options

Delete

Add sorting condition

ResultCodeDebugExtra

To embed this query inline into a wiki page use the code below.

{{#ask: [[Category:Reaction]]
 |?Common-name
 |?Ec-number
 |?Nb gene associated
 |?Nb pathway associated
 |?Nb reconstruction source
 |?Reconstruction category
 |?Reconstruction tool
 |?Reconstruction comment
 |format=table
 |limit=50
 |offset=30
 |sort=
 |order=asc
 |mainlabel=
}}

Results 31 – 80 previous 50 20 50 100 250 500 next 50

JSON CSV RSS RDF

The query [[Category:Reaction]] was answered by the "SMWSQLStore" in 0.0508 seconds.

SQLStore debug output

ASK Query

[[Category:Reaction]]

SQL Query

SELECT DISTINCT
t0.smw_id AS id,
  t0.smw_title AS t,
  t0.smw_namespace AS ns,
  t0.smw_iw AS iw,
  t0.smw_subobject AS so,
  t0.smw_sortkey AS sortkey, t0.smw_sort
FROM
`cokagem_smw_object_ids` AS t0
INNER JOIN
`cokagem_smw_fpt_inst` AS t1 ON t0.smw_id=t1.s_id
WHERE
(t1.o_id='534')
  AND t0.smw_iw!=':smw'
  AND t0.smw_iw!=':smw-delete'
  AND t0.smw_iw!=':smw-redi'
ORDER BY
t0.smw_sort ASC
LIMIT
55
OFFSET
30

SQL Explain

ID	select_type	table	type	possible_keys	key	key_len	ref	rows	Extra
1	SIMPLE	t1	ref	s_id,o_id,s_id_2,o_id_2	o_id_2	5	const	3402	Using index; Using temporary; Using filesort
1	SIMPLE	t0	eq_ref	PRIMARY,smw_id,smw_iw,smw_iw_2	PRIMARY	4	wikidb.t1.s_id	1	Using where

Auxilliary Tables

No auxilliary tables used.

Query Metrics

Query-Size:1
Query-Depth:0

Errors and Warnings

None

	Common-name	Ec-number	Nb gene associated	Nb pathway associated	Reconstruction category	Reconstruction tool	Reconstruction comment
1.14.11.18-RXN		Ec-1.14.11.18	2	0	Orthology	Pantograph	N.a
1.14.11.2-RXN	Procollagen-proline 4-dioxygenase	Ec-1.14.11.2	19	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.14.13.54-RXN	Ketosteroid monooxygenase	Ec-1.14.13.54	1	0	Annotation	Pathwaytools	N.a
1.14.13.70-RXN	Sterol 14-demethylase	Ec-1.14.13.70	11	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.14.13.78-RXN	Ent-kaurene 19-hydroxylase		4	2	Orthology	Pantograph	N.a
1.14.13.79-RXN	Ent-kaurenoate monooxygenase		12	2	Orthology	Pantograph	N.a
1.14.13.8-RXN	N,n-dimethylaniline monooxygenase Dimethylaniline monooxygenase	Ec-1.14.13.8	9	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.14.13.93-RXN	Abscisic acid 8'-hydroxylase	Ec-1.14.13.93	3	1	Annotation	Pathwaytools	N.a
1.14.19.1-RXN	Stearoyl-coa 9-desaturase	Ec-1.14.19.1	3	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.14.19.3-RXN		Ec-1.14.19.3	1	1	Orthology	Pantograph	N.a
1.14.21.6-RXN	5α-cholest-7-en-3β-ol,nad(p)h:oxygen 5-oxidoreductase	Ec-1.14.19.20	2	2	Annotation Orthology	Pathwaytools Pantograph	N.a
1.14.99.33-RXN	Delta12-fatty acid dehydrogenase	Ec-1.14.19.39	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.14.99.38-RXN	Cholesterol 25-hydroxylase	Ec-1.14.99.38	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.17.4.2-RXN	Ribonucleoside-triphosphate reductase	Ec-1.17.4.2	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.18.1.2-RXN	Ferredoxin nadp reductase	Ec-1.18.1.2	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.2.1.18-RXN	Malonate-semialdehyde dehydrogenase (acetylating)	Ec-1.2.1	2	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.2.1.2-RXN		Ec-1.17.1.9	1	4	Orthology	Pantograph	N.a
1.2.1.25-RXN		Ec-1.2.1.25	1	1	Orthology	Pantograph	N.a
1.2.1.27-RXN	Methylmalonate-semialdehyde dehydrogenase	Ec-1.2.1.27	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.2.4.4-RXN	3-methyl-2-oxobutanoate dehydrogenase	Ec-1.2.4.4	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.21.3.1-RXN		Ec-1.21.3.1	1	1	Orthology	Pantograph	N.a
1.3.1.20-RXN	Aldo-keto reductase family 1 member c1 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase	Ec-1.3.1.20	3	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.3.1.9-RXN		Ec-1.3.1.9	2	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.3.7.2-RXN	15,16-dihydrobiliverdin:ferredoxin oxidoreductase	Ec-1.3.7.2	3	2	Annotation Orthology	Pathwaytools Pantograph	N.a
1.3.7.3-RXN	Phycoerythrobilin:ferredoxin oxidoreductase	Ec-1.3.7.3	1	2	Annotation	Pathwaytools	N.a
1.3.99.23-RXN		Ec-1.3.99.23	1	0	Orthology	Pantograph	N.a
1.3.99.5-RXN	A 3-oxo-δ4-steroid 5α-reductase	Ec-1.3.1.22	4	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.4.3.19-RXN	Glycine oxidase	Ec-1.4.3.19	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.5.1.11-RXN		Ec-1.5.1.11	1	1	Orthology	Pantograph	N.a
1.5.1.15-RXN		Ec-1.5.1.15	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.5.1.19-RXN		Ec-1.5.1.19	1	0	Orthology	Pantograph	N.a
1.5.1.20-RXN	5,10-methylenetetrahydrofolate reductase	Ec-1.5.1.20	3	4	Annotation Orthology	Pathwaytools Pantograph	N.a
1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44.			0	0	Gap-filling	Meneco	Added for gapfilling
1.5.1.25-RXN		Ec-1.5.1.25	1	0	Orthology	Pantograph	N.a
1.5.1.9-RXN		Ec-1.5.1.9	1	1	Orthology	Pantograph	N.a
1.5.5.1-RXN	Electron transfer flavoprotein-ubiquinone oxidoreductase	Ec-1.5.5.1	2	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.6.4.4-RXN	Protein-disulfide reductase	Ec-1.8.1.8	11	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.6.5.4-RXN	Monodehydroascorbate reductase (nadh)	Ec-1.6.5.4	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.8.1.4-RXN	Dihydrolipoyl dehydrogenase Dihydrolipoamide dehydrogenase	Ec-1.8.1.4	3	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.8.3.5-RXN		Ec-1.8.3.5	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.8.4.12-RXN	Protein-methionine-s-oxide reductase Peptide-methionine (r)-s-oxide reductase	Ec-1.8.4.12	8	0	Annotation Orthology	Pathwaytools Pantograph	N.a
1.8.4.14-RXN		Ec-1.8.4.14	1	0	Orthology	Pantograph	N.a
1.8.4.8-RXN	3'-phospho-adenylylsulfate reductase	Ec-1.8.4.8	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1.8.4.9-RXN		Ec-1.8.4.9	1	1	Orthology	Pantograph	N.a
1.8.5.1-RXN	Dehydroascorbate reductase	Ec-1.8.5.1	5	2	Annotation Orthology	Pathwaytools Pantograph	N.a
12-OXOPHYTODIENOATE-REDUCTASE-RXN		Ec-1.3.1.42	2	1	Orthology	Pantograph	N.a
13-BETA-GLUCAN-SYNTHASE-RXN	1,3-beta-d-glucan synthase	Ec-2.4.1.34	4	1	Annotation Orthology	Pathwaytools Pantograph	N.a
1TRANSKETO-RXN	Transketolase	Ec-2.2.1.1	2	7	Annotation Orthology	Pathwaytools Pantograph	N.a
2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN		Ec-2.3.1.22	7	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN-CPD66-43/STEAROYL-COA//CPD-17271/CO-A.38.			0	0	Gap-filling	Meneco	Added for gapfilling

Semantic search

Navigation menu

Personal tools

Namespaces

Variants

Views

More

Search

Navigation

Metabolic network components

Reconstruction categories

Reconstruction tools

Tools