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	Common-name	Ec-number	Nb gene associated	Nb pathway associated	Reconstruction category	Reconstruction tool	Reconstruction comment
2.4.1.229-RXN		Ec-2.4.1.229	4	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.1.38-RXN	Beta-n-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase Β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase	Ec-2.4.1.38	2	4	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.1.46-RXN	Monogalactosyldiacylglycerol synthase	Ec-2.4.1.46	3	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.1.67-RXN		Ec-2.4.1.67	2	1	Orthology	Pantograph	N.a
2.4.1.68-RXN	Glycoprotein 6-alpha-l-fucosyltransferase	Ec-2.4.1.68	7	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.1.82-RXN	Raffinose synthase	Ec-2.4.1.82	2	3	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.1.83-RXN	Dolichol phosphate mannose synthase	Ec-2.4.1.83	2	3	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.1.94-RXN	Protein n-acetylglucosaminyltransferase	Ec-2.4.1.94	15	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.2.26-RXN	Protein xylosyltransferase	Ec-2.4.2.26	15	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.2.31-RXN	Nad+—protein-arginine adp-ribosyltransferase	Ec-2.4.2.31	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.4.2.38-RXN		Ec-2.4.2.38	1	1	Orthology	Pantograph	N.a
2.5.1.19-RXN	3-phosphoshikimate-1-carboxyvinyltransferase	Ec-2.5.1.19	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.5.1.32-RXN	Geranylgeranyl-diphosphate geranylgeranyltransferase		1	3	Annotation Orthology	Pathwaytools Pantograph	N.a
2.5.1.42-RXN	Geranylgeranylglycerol-phosphate geranylgeranyltransferase	Ec-2.5.1.42	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.5.1.58-RXN	Farnesyltransferase	Ec-2.5.1.58	2	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.5.1.64-RXN	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase	Ec-2.2.1.9	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.6.1.57-RXN	L-phenylalanine:2-oxoglutarate aminotransferase	Ec-2.6.1.57	6	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.6.1.64-RXN	Glutamine-phenylpyruvate transaminase	Ec-2.6.1.64	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.6.1.7-RXN	Kynurenine-oxoglutarate transaminase	Ec-2.6.1.7	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.109-RXN		Ec-2.7.11.31	1	0	Annotation	Pathwaytools	N.a
2.7.1.127-RXN		Ec-2.7.1.127	2	3	Orthology	Pantograph	N.a
2.7.1.133-RXN	Inositol 1,3,4-triphosphate 6 kinase	Ec-2.7.1.159	2	4	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.134-RXN	Inositol-tetrakisphosphate 1-kinase	Ec-2.7.1.134	2	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.139-RXN	Myo-inositol polyphosphate kinase	Ec-2.7.1.159	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.140-RXN		Ec-2.7.1.140	1	5	Orthology	Pantograph	N.a
2.7.1.148-RXN	4-diphosphocytidyl-2-c-methylerythritol kinase	Ec-2.7.1.148	1	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.150-RXN	Phosphatidylinositol-3-phosphate 5-kinase 1-phosphatidylinositol-3-phosphate 5-kinase	Ec-2.7.1.150	4	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.151-RXN		Ec-2.7.1.151	1	1	Orthology	Pantograph	N.a
2.7.1.152-RXN	Inositol hexakisphosphate kinase Inositol hexakisphosphate 5-kinase	Ec-2.7.4.21	4	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.153-RXN	Phosphatidylinositol-4,5-bisphosphate 3-kinase	Ec-2.7.1.153	1	1	Annotation	Pathwaytools	N.a
2.7.1.160-RXN	Trna 2'-phosphotransferase	Ec-2.7.1.160	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.68-RXN	Phosphatidylinositol 4 phosphate 5 kinase	Ec-2.7.1.68	17	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.1.90-RXN	Diphosphate:fructose-6-phosphate 1-phosphotransferase	Ec-2.7.1.90	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.10.1-RXN	Protein-tyrosine kinase Transmembrane receptor protein tyrosine kinase Protein serine/threonine/tyrosine kinase Non-membrane spanning protein tyrosine kinase	Ec-2.7.10.2 Ec-2.7.12.1 Ec-2.7.10.1	135	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.10-RXN		Ec-2.7.11.10	1	0	Annotation	Pathwaytools	N.a
2.7.11.14-RXN	Rhodopsin kinase	Ec-2.7.11.14	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.15-RXN		Ec-2.7.11.15	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.16-RXN	G-protein coupled receptor kinase	Ec-2.7.11.16	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.18-RXN	Myosin light chain kinase	Ec-2.7.11.18	13	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.2-RXN	Pyruvate dehydrogenase kinase	Ec-2.7.11.2	5	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.24-RXN	Protein kinase Map kinase	Ec-2.7.11.24	17	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.25-RXN	Map kinase kinase kinase	Ec-2.7.11.25	28	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.27-RXN		Ec-2.7.11.27	1	0	Annotation	Pathwaytools	N.a
2.7.11.30-RXN	Transmembrane receptor protein serine/threonine kinase	Ec-2.7.11.30	18	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.11.4-RXN		Ec-2.7.11.4	4	0	Orthology	Pantograph	N.a
2.7.11.7-RXN	Myosin heavy chain kinase	Ec-2.7.11.7	5	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.12.1-RXN	Protein serine/threonine/tyrosine kinase Camp-dependent protein kinase Tyrosine-phosphorylation-regulated kinase	Ec-2.7.12.1 Ec-2.7.11.11	87	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.12.2-RXN	Map kinase kinase	Ec-2.7.12.2	11	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.13.3-RXN	Protein histidine kinase	Ec-2.7.13.3	27	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.4.10-RXN		Ec-2.7.4.10	1	0	Orthology	Pantograph	N.a
2.7.4.24-RXN	5-diphosphoinositol-pentakisphosphate 1-kinase	Ec-2.7.4.24	2	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.1-RXN	Nmn adenylyltransferase	Ec-2.7.7.1	2	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.11-RXN	Utp:xylose-1-phosphate uridylyltransferase	Ec-2.7.7.11	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.14-RXN	Ethanolamine-phosphate cytidylyltransferase	Ec-2.7.7.14	1	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.15-RXN	Choline-phosphate cytidylyltransferase	Ec-2.7.7.15	1	6	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.30-RXN	Fucose-1-phosphate guanylyltransferase	Ec-2.7.7.30	1	1	Annotation	Pathwaytools	N.a
2.7.7.44-RXN	Glucuronate-1-phosphate uridylyltransferase	Ec-2.7.7.44	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.60-RXN	4-diphosphocytidyl-2c-methyl-d-erythritol synthase	Ec-2.7.7.60	1	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.64-RXN	Utp-monosaccharide-1-phosphate uridylyltransferase Udp-sugar pyrophosphorylase	Ec-2.7.7.64	4	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.7.8-RXN	Polynucleotide phosphorylase	Ec-2.7.7.8	3	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.8.11-RXN	Phosphatidylinositol synthase	Ec-2.7.8.11	2	4	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.8.15-RXN	Udp-n-acetylglucosamine—dolichyl-phosphate n-acetylglucosaminephosphotransferase	Ec-2.7.8.15	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.8.17-RXN	Udp-n-acetylglucosamine-lysosomal-enzyme n-acetylglucosaminephosphotransferase	Ec-2.7.8.17	18	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.8.23-RXN		Ec-2.7.8.23	1	0	Orthology	Pantograph	N.a
2.7.8.27-RXN	Sphingomyelin synthase	Ec-2.7.8.27	1	0	Annotation Orthology	Pathwaytools Pantograph	N.a
2.7.9.3-RXN	Selenide, water dikinase	Ec-2.7.9.3	1	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.8.1.6-RXN	Biotin synthase	Ec-2.8.1.6	1	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2.8.2.23-RXN		Ec-2.8.2.23	8	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.8.2.29-RXN		Ec-2.8.2.29	4	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2.8.2.30-RXN		Ec-2.8.2.30	3	1	Annotation Orthology	Pathwaytools Pantograph	N.a
23-DIMETHYLMALATE-LYASE-RXN	2,3-dimethylmalate lyase	Ec-4.1.3.32	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
2KETO-3METHYLVALERATE-RXN	(s)-3-methyl-2-oxopentanoate dehydrogenase (acylating)	Ec-1.2.1	2	2	Orthology	Pantograph	N.a
2OXOGLUTARATEDEH-RXN	2-oxoglutarate dehydrogenase complex		2	3	Orthology	Pantograph	N.a
2OXOGLUTDECARB-RXN	2-oxoglutarate decarboxylase	Ec-1.2.4.2	3	2	Annotation Orthology	Pathwaytools Pantograph	N.a
2PGADEHYDRAT-RXN	Phosphopyruvate hydratase Enolase	Ec-4.2.1.11	3	19	Annotation Orthology	Pathwaytools Pantograph	N.a
2TRANSKETO-RXN	Transketolase	Ec-2.2.1.1	2	7	Annotation Orthology	Pathwaytools Pantograph	N.a
3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN	3-methyl-2-oxobutanoate hydroxymethyltransferase	Ec-2.1.2.11	1	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-DEHYDROQUINATE-DEHYDRATASE-RXN	3-dehydroquinate dehydratase	Ec-4.2.1.10	3	4	Annotation Orthology	Pathwaytools Pantograph	N.a
3-DEHYDROQUINATE-SYNTHASE-RXN	3-dehydroquinate synthase	Ec-4.2.3.4	4	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-DEHYDROSPHINGANINE-REDUCTASE-RXN	3-ketodihydrosphingosine reductase	Ec-1.1.1.102	2	3	Annotation Orthology	Pathwaytools Pantograph	N.a
3-HYDROXBUTYRYL-COA-DEHYDRATASE-RXN	Crotonyl-coa hydratase	Ec-4.2.1.55	1	2	Annotation	Pathwaytools	N.a
3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN		Ec-1.1.1.30	4	2	Orthology	Pantograph	N.a
3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN		Ec-1.1.1.157	1	0	Orthology	Pantograph	N.a
3-HYDROXYDECANOYL-ACP-DEHYDR-RXN	Fatty acid synthase	Ec-4.2.1.59 Ec-2.3.1.85 Ec-2.3.1.86	21	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN	3-hydroxyisobutyrate dehydrogenase	Ec-1.1.1.31	8	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN	3-hydroxyisobutyryl-coa hydrolase	Ec-3.1.2.4	13	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-ISOPROPYLMALDEHYDROG-RXN	3-isopropylmalate dehydrogenase		1	2	Annotation Orthology	Pathwaytools Pantograph	N.a
3-ISOPROPYLMALISOM-RXN	3-isopropylmalate dehydratase (2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)		3	2	Annotation Orthology	Pathwaytools Pantograph	N.a
3-OXOACYL-ACP-REDUCT-RXN	Fatty acid synthase	Ec-2.3.1.85 Ec-2.3.1.86 Ec-1.1.1.100	21	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-OXOACYL-ACP-SYNTH-BASE-RXN	Fatty acid synthase	Ec-2.3.1.85 Ec-2.3.1.86 Ec-2.3.1.41 Ec-2.3.1.179	21	4	Annotation Orthology	Pathwaytools Pantograph	N.a
3-OXOACYL-ACP-SYNTH-RXN	Fatty acid synthase	Ec-2.3.1.85 Ec-2.3.1.86 Ec-2.3.1.41 Ec-2.3.1.179	21	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN		Ec-3.1.3.38	0	0	Gap-filling	Meneco	Added for gapfilling
3-SULFINOALANINE-AMINOTRANSFERASE-RXN		Ec-2.6.1	1	1	Orthology	Pantograph	N.a
3.1.1.23-RXN	Acylglycerol lipase Monoacylglycerol lipase	Ec-3.1.1.23	27	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3.1.1.47-RXN	Platelet-activating factor acetylhydrolase 1-alkyl-2-acetylglycerophosphocholine esterase	Ec-3.1.1.47	4	0	Annotation Orthology	Pathwaytools Pantograph	N.a
3.1.1.56-RXN		Ec-3.1.1.56	1	0	Orthology	Pantograph	N.a
3.1.1.64-RXN	Carboxylic ester hydrolase All-trans-retinyl-palmitate hydrolase	Ec-3.1.1.1	108	0	Annotation Orthology	Pathwaytools Pantograph	N.a
3.1.1.69-RXN		Ec-3.5.1.89	2	0	Annotation Orthology	Pathwaytools Pantograph	N.a
3.1.1.73-RXN	Feruloyl esterase	Ec-3.1.1.73	3	1	Annotation Orthology	Pathwaytools Pantograph	N.a
3.1.1.75-RXN	Poly(3-hydroxybutyrate) depolymerase	Ec-3.1.1.75	2	0	Annotation Orthology	Pathwaytools Pantograph	N.a

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