Semantic search

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Condition
Printout selection
Options
Parameters [
limit:

The maximum number of results to return
offset:

The offset of the first result
link:

Show values as links
headers:

Display the headers/property names
mainlabel:

The label to give to the main page name
intro:

The text to display before the query results, if there are any
outro:

The text to display after the query results, if there are any
searchlabel:

Text for continuing the search
default:

The text to display if there are no query results
class:

An additional CSS class to set for the table
transpose:

Display table headers vertically and results horizontally
sep:

The separator between results
Sort options
Delete
Add sorting condition
SQLStore debug output
ASK Query
[[Category:Reaction]] [[Reconstruction category::Gap-filling]]
SQL Query
SELECT DISTINCT
  t0.smw_id AS id,
  t0.smw_title AS t,
  t0.smw_namespace AS ns,
  t0.smw_iw AS iw,
  t0.smw_subobject AS so,
  t0.smw_sortkey AS sortkey, t0.smw_sort
FROM
  `cokagem_smw_object_ids` AS t0
INNER JOIN
  (`cokagem_smw_fpt_inst` AS t2
INNER JOIN
  `cokagem_smw_di_wikipage` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
WHERE
  (t2.o_id='534'
   AND (t4.p_id='13720' AND t4.o_id='564')
  )
  AND t0.smw_iw!=':smw'
  AND t0.smw_iw!=':smw-delete'
  AND t0.smw_iw!=':smw-redi'
ORDER BY
  t0.smw_sort ASC
LIMIT
  55
OFFSET
  0
SQL Explain
IDselect_typetabletypepossible_keyskeykey_lenrefrowsExtra
1SIMPLEt4refs_id,o_id,p_id,s_id_2,s_id_3,o_id_2,o_id_3o_id5const67Using where; Using temporary; Using filesort
1SIMPLEt2refs_id,o_id,s_id_2,o_id_2s_id_29wikidb.t4.s_id,const1Using index
1SIMPLEt0eq_refPRIMARY,smw_id,smw_iw,smw_iw_2PRIMARY4wikidb.t4.s_id1Using where
Auxilliary Tables
No auxilliary tables used.
Query Metrics
Query-Size:3
Query-Depth:1
Errors and Warnings
None
 Common-nameEc-numberReconstruction toolReconstruction sourceReconstruction commentNb gene associatedNb pathway associated
1.5.1.20-RXN-5-METHYL-THF/NAD//METHYLENE-THF/NADH/PROTON.44.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
2-ACYLGLYCEROL-O-ACYLTRANSFERASE-RXN-CPD66-43/STEAROYL-COA//CPD-17271/CO-A.38.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
3-PHOSPHOGLYCERATE-PHOSPHATASE-RXNEc-3.1.3.38MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
3.1.4.14-RXNEc-3.1.4.14MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
5-AMINOLEVULINIC-ACID-SYNTHASE-RXNEc-2.3.1.37MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
ACECOATRANS-RXN-CPD-10280/ACET//TETRACOSANOATE/ACETYL-COA.42.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
ACETOLACTSYN-RXNEc-2.2.1.6MenecoGapfilling solution with meneco draft mediumAdded for gapfilling05
ADENYLYLSULFATE-REDUCTASE-RXNEc-1.8.99.2MenecoGapfilling solution with meneco draft mediumAdded for gapfilling04
ALGINATE-SYNTHASE-RXNEc-2.4.1.33MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
CYSPH-RXNEc-2.5.1MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
CYSTATHIONASE-RXNMenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
FATTY-ACID-PEROXIDASE-RXNEc-1.11.1.3MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
FESO3OXI-RXNMenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
GDPMANMANHYDRO-RXN-GDP-MANNOSE/WATER//CPD-15373/GDP/PROTON.40.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
GLUCISOM-RXNGlucose isomeraseEc-5.3.1.5MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
GLUCISOM-RXN-ALPHA-GLUCOSE//CPD-15382.25.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
GLUCISOM-RXN-GLC//CPD-15382.15.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
GLYCEROL-DEHYDROGENASE-NADP+-RXNEc-1.1.1.372
Ec-1.1.1.72
MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
GLYOCARBOLIG-RXNEc-4.1.1.47MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
HISTIDPHOS-RXNEc-3.1.3.15MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
HISTIDPHOS-RXN-CCO-CYTOSOL--L-HISTIDINOL-P/WATER//HISTIDINOL/Pi.49.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
HOMOSERINE-O-ACETYLTRANSFERASE-RXNEc-2.3.1.31MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
HOMSUCTRAN-RXNEc-2.3.1.46MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
HYDROXYPYRUVATE-DECARBOXYLASE-RXNEc-4.1.1.40MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
LINOLEOYL-RXNEc-3.1.2MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
MANNITOL-1-PHOSPHATASE-RXNEc-3.1.3.22MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
PHOSPHATIDATE-PHOSPHATASE-RXN-CPD0-1422/WATER//CPD66-34/Pi.29.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
PHOSPHOGLYCERATE-PHOSPHATASE-RXNEc-3.1.3.20MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-10662Ec-3.1.2MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-10727Myristoyl-acp hydrolase activityEc-3.1.2.14MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-11820-STEARIC ACID/HYDROGEN-PEROXIDE//R-2-HYDROXYSTEARATE/WATER.58.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-13191Ec-1.14.13.81MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-13307Ec-1.3.1.93MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN-13308Ec-1.3.1.93MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN-13431Ec-2.3.1MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN-13852Anaerobic magnesium-protoporphyrin ix monomethyl ester cyclaseEc-1.21.98.3MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-14037MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-14575MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN-16016Ec-2.3.1MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN-1602-CPD-17271/WATER//CPD66-43/STEARIC ACID/PROTON.46.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-16415-TETRACOSANOATE/ATP/CO-A//CPD-10280/AMP/PPI.43.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-17725-CCO-CYTOSOL--MANNOSE-1P/WATER//CPD-15373/Pi.44.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-701Ec-1.8.1MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-7738Ec-3.1.1.14MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
RXN-7952-CPD66-43/WATER//GLYCEROL/PALMITATE/PROTON.42.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN-9548Ec-3.1.2.14MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN-9549Ec-3.1.2.14MenecoGapfilling solution with meneco draft mediumAdded for gapfilling03
RXN-974MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN0-6562MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00