Semantic search

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Condition
Printout selection
Options
Parameters [
limit:

The maximum number of results to return
offset:

The offset of the first result
link:

Show values as links
headers:

Display the headers/property names
mainlabel:

The label to give to the main page name
intro:

The text to display before the query results, if there are any
outro:

The text to display after the query results, if there are any
searchlabel:

Text for continuing the search
default:

The text to display if there are no query results
class:

An additional CSS class to set for the table
transpose:

Display table headers vertically and results horizontally
sep:

The separator between results
Sort options
Delete
Add sorting condition
SQLStore debug output
ASK Query
[[Category:Reaction]] [[Reconstruction category::Gap-filling]]
SQL Query
SELECT DISTINCT
  t0.smw_id AS id,
  t0.smw_title AS t,
  t0.smw_namespace AS ns,
  t0.smw_iw AS iw,
  t0.smw_subobject AS so,
  t0.smw_sortkey AS sortkey, t0.smw_sort
FROM
  `cokagem_smw_object_ids` AS t0
INNER JOIN
  (`cokagem_smw_fpt_inst` AS t2
INNER JOIN
  `cokagem_smw_di_wikipage` AS t4 ON t2.s_id=t4.s_id) ON t0.smw_id=t2.s_id
WHERE
  (t2.o_id='534'
   AND (t4.p_id='13720' AND t4.o_id='564')
  )
  AND t0.smw_iw!=':smw'
  AND t0.smw_iw!=':smw-delete'
  AND t0.smw_iw!=':smw-redi'
ORDER BY
  t0.smw_sort ASC
LIMIT
  55
OFFSET
  50
SQL Explain
IDselect_typetabletypepossible_keyskeykey_lenrefrowsExtra
1SIMPLEt4refs_id,o_id,p_id,s_id_2,s_id_3,o_id_2,o_id_3o_id5const67Using where; Using temporary; Using filesort
1SIMPLEt2refs_id,o_id,s_id_2,o_id_2s_id_29wikidb.t4.s_id,const1Using index
1SIMPLEt0eq_refPRIMARY,smw_id,smw_iw,smw_iw_2PRIMARY4wikidb.t4.s_id1Using where
Auxilliary Tables
No auxilliary tables used.
Query Metrics
Query-Size:3
Query-Depth:1
Errors and Warnings
None
 Common-nameEc-numberReconstruction toolReconstruction sourceReconstruction commentNb gene associatedNb pathway associated
RXN0-7250Ec-3.1.3MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN0-7250-CCO-CYTOSOL--GAP/WATER//GLYCERALD/Pi.37.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN3O-5304Ec-2.3.1.86
Ec-2.3.1
MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
RXN3O-8214Ec-2.3.1MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN3O-9780Ec-2.3.1MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
RXN66-474-R-2-HYDROXYSTEARATE/ATP/CO-A//CPD-14717/AMP/PPI.48.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN66-475-CPD-14717//CPD-14719/FORMYL-COA.32.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN66-476-CPD-14719/NAD/WATER//CPD-7830/NADH/PROTON.42.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
RXN66-476-CPD-388/NAD/WATER//CPD-8462/NADH/PROTON.40.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXNEc-2.6.1.45MenecoGapfilling solution with meneco draft mediumAdded for gapfilling01
SERINE--PYRUVATE-AMINOTRANSFERASE-RXNEc-2.6.1.51MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
SERINE-DEHYDROGENASE-RXNEc-1.4.1.7MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXNEc-2.6.1.45MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
SULFITE-REDUCT-RXNEc-1.8.1.2MenecoGapfilling solution with meneco draft mediumAdded for gapfilling02
THIOESTER-RXN-CCO-CYTOSOL--CPD-10280/WATER//TETRACOSANOATE/CO-A/PROTON.57.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10279/NAD//CPD-14281/NADH/PROTON.37.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00
TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37.MenecoGapfilling solution with meneco draft mediumAdded for gapfilling00