Difference between revisions of "SJ17441"
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(Created page with "Category:gene == Gene SJ19920 == * transcription-direction: ** negative * right-end-position: ** 493230 * left-end-position: ** 481983 * centisome-position: ** 77.23307...") |
(Created page with "Category:gene == Gene SJ14181 == * transcription-direction: ** positive * right-end-position: ** 148608 * left-end-position: ** 140680 * centisome-position: ** 19.580797...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14181 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 148608 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 140680 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 19.580797 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.4.1.38-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[LACTOSE-SYNTHASE-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[N-ACETYLLACTOSAMINE-SYNTHASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-15276]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-15277]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-15278]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7837]] |
| − | ** ''' | + | ** '''3''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7434]] |
| − | ** ''' | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
| − | + | * [[PWY-7831]] | |
| − | + | ** '''2''' reactions found over '''11''' reactions in the full pathway | |
| − | * [[PWY- | + | * [[PWY-7833]] |
| − | ** '''2''' reactions found over ''' | + | ** '''2''' reactions found over '''9''' reactions in the full pathway |
| − | * [[PWY- | + | {{#set: transcription-direction=positive}} |
| − | ** '''2''' reactions found over ''' | + | {{#set: right-end-position=148608}} |
| − | + | {{#set: left-end-position=140680}} | |
| − | + | {{#set: centisome-position=19.580797 }} | |
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 09:25, 27 August 2019
Contents
Gene SJ14181
- transcription-direction:
- positive
- right-end-position:
- 148608
- left-end-position:
- 140680
- centisome-position:
- 19.580797
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.38-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- LACTOSE-SYNTHASE-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- N-ACETYLLACTOSAMINE-SYNTHASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15276
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15277
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15278
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7837
- 3 reactions found over 5 reactions in the full pathway
- PWY-7434
- 5 reactions found over 8 reactions in the full pathway
- PWY-7831
- 2 reactions found over 11 reactions in the full pathway
- PWY-7833
- 2 reactions found over 9 reactions in the full pathway
