Difference between revisions of "2.4.1.38-RXN"

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(Created page with "Category:reaction == Reaction RXN-12381 == * direction: ** left-to-right * common-name: ** trna (n2-methylguanine27-n2-methyltransferase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction 2.4.1.38-RXN == * direction: ** left-to-right * common-name: ** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase * ec...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12381 ==
+
== Reaction 2.4.1.38-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** trna (n2-methylguanine27-n2-methyltransferase
+
** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.215 ec-2.1.1.215]
+
** [http://enzyme.expasy.org/EC/2.4.1.38 ec-2.4.1.38]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-Containing-N2-Dimetgua-26-MeGua27]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-Containing-N2-DiMeGua-26-DiMeGua27]][c]
+
* 1 [[BETA-ACETYLGLUCOSAMINIDE]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14807]]
+
* Gene: [[SJ14181]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ09381]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7831]], ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide:
 +
** '''2''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7833]], biosynthesis of Lewis epitopes (H. pylori):
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7837]], i antigen and I antigen biosynthesis:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide):
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115145
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22933 22933]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04495 R04495]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P15535 P15535]
 +
** [http://www.uniprot.org/uniprot/P15291 P15291]
 +
** [http://www.uniprot.org/uniprot/Q7LZ60 Q7LZ60]
 +
** [http://www.uniprot.org/uniprot/P08037 P08037]
 +
** [http://www.uniprot.org/uniprot/Q90580 Q90580]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=trna (n2-methylguanine27-n2-methyltransferase}}
+
{{#set: common-name=β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase}}
−
{{#set: ec-number=ec-2.1.1.215}}
+
{{#set: ec-number=ec-2.4.1.38}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction 2.4.1.38-RXN

  • direction:
    • left-to-right
  • common-name:
    • β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7831, ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide:
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-7833, biosynthesis of Lewis epitopes (H. pylori):
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-7837, i antigen and I antigen biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7434, terminal O-glycans residues modification (via type 2 precursor disaccharide):
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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