Difference between revisions of "3-ISOPROPYLMALISOM-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] == * direction: ** left-to-right * common-name: ** nadh:ubiquinone oxidoreduct...")
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-332...")
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[[Category:reaction]]
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[[Category:pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3] ==
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* direction:
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* taxonomic-range:
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
 
* common-name:
 
* common-name:
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** nadh:ubiquinone oxidoreductase
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** cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)
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** nadh dehydrogenase (ubiquinone)
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== Reaction(s) found ==
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* ec-number:
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* [[1.14.21.6-RXN]]
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** [http://enzyme.expasy.org/EC/1.6.5.9 ec-1.6.5.9]
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* [[RXN66-11]]
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== Reaction formula ==
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* [[RXN66-12]]
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* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Ubiquinols]][c]
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* [[RXN66-13]]
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== Gene(s) associated with this reaction  ==
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* [[RXN66-14]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[RXN66-18]]
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* Gene: [[SJ21895]]
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* [[RXN66-19]]
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** Category: [[annotation]]
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* [[RXN66-23]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN66-24]]
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* Gene: [[SJ15450]]
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* [[RXN66-323]]
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** Category: [[annotation]]
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== Reaction(s) not found ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-10 RXN66-10]
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* Gene: [[SJ22333]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-21 RXN66-21]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-17 RXN66-17]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-20 RXN66-20]
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** Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-22 RXN66-22]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-16 RXN66-16]
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* Gene: [[SJ19412]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-25 RXN66-25]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-15 RXN66-15]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: taxonomic-range=tax-33208}}
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* Gene: [[SJ15310]]
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{{#set: common-name=cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)}}
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** Category: [[annotation]]
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{{#set: nb reaction found=10}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: completion rate=0.56}}
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* Gene: [[SJ10422]]
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{{#set: nb total reaction=18}}
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ02471]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ03600]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ21333]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ14995]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ05715]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ09960]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ16410]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ21017]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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</div>
 
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== Pathway(s) ==
 
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* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY0-1573]], nitrate reduction VIIIb (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1573 PWY0-1573]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7269 PWY-7269]
 
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY0-1568]], NADH to cytochrome bd oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1568 PWY0-1568]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY0-1567]], NADH to cytochrome bo oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23153 23153]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=nadh dehydrogenase (ubiquinone)|nadh:ubiquinone oxidoreductase}}
 
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{{#set: ec-number=ec-1.6.5.9}}
 
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{{#set: nb gene associated=14}}
 
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{{#set: nb pathway associated=5}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 09:32, 27 August 2019

Pathway PWY66-3

  • taxonomic-range:
  • common-name:
    • cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)

Reaction(s) found

Reaction(s) not found



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