Difference between revisions of "3-ISOPROPYLMALISOM-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-332...")
(Created page with "Category:reaction == Reaction RXN-17113 == * direction: ** left-to-right * common-name: ** (6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa oxidase ** acyl-coa oxidase * ec-num...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3] ==
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== Reaction RXN-17113 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** left-to-right
 
* common-name:
 
* common-name:
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** cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)
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** (6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa oxidase
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== Reaction(s) found ==
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** acyl-coa oxidase
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* [[1.14.21.6-RXN]]
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* ec-number:
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* [[RXN66-11]]
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** [http://enzyme.expasy.org/EC/1.3.3.6 ec-1.3.3.6]
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* [[RXN66-12]]
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== Reaction formula ==
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* [[RXN66-13]]
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* 1 [[CPD-18491]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-18492]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* [[RXN66-14]]
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== Gene(s) associated with this reaction  ==
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* [[RXN66-18]]
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* Gene: [[SJ07451]]
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* [[RXN66-19]]
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** Category: [[annotation]]
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* [[RXN66-23]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN66-24]]
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** Category: [[orthology]]
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* [[RXN66-323]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Reaction(s) not found ==
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* Gene: [[SJ07452]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-10 RXN66-10]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-21 RXN66-21]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-17 RXN66-17]
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* Gene: [[SJ03090]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-20 RXN66-20]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-22 RXN66-22]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-16 RXN66-16]
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* Gene: [[SJ13468]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-25 RXN66-25]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-15 RXN66-15]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: taxonomic-range=tax-33208}}
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** Category: [[orthology]]
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{{#set: common-name=cholesterol biosynthesis ii (via 24,25-dihydrolanosterol)}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=10}}
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* Gene: [[SJ19669]]
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{{#set: completion rate=0.56}}
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** Category: [[orthology]]
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{{#set: nb total reaction=18}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
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** '''8''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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{{#set: direction=left-to-right}}
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{{#set: common-name=acyl-coa oxidase|(6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa oxidase}}
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{{#set: ec-number=ec-1.3.3.6}}
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{{#set: nb gene associated=5}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:42, 18 December 2020

Reaction RXN-17113

  • direction:
    • left-to-right
  • common-name:
    • (6z,9z,12z,15z,18z)-tetracosapentaenoyl-coa oxidase
    • acyl-coa oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
    • 8 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=3-ISOPROPYLMALISOM-RXN&oldid=50413"