Difference between revisions of "SJ08678"

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(Created page with "Category:gene == Gene SJ18680 == * transcription-direction: ** negative * right-end-position: ** 88546 * left-end-position: ** 80853 * centisome-position: ** 33.818527...")
(Created page with "Category:gene == Gene SJ09771 == * transcription-direction: ** negative * right-end-position: ** 34418 * left-end-position: ** 6694 * centisome-position: ** 1.6473727...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18680 ==
+
== Gene SJ09771 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 88546
+
** 34418
 
* left-end-position:
 
* left-end-position:
−
** 80853
+
** 6694
 
* centisome-position:
 
* centisome-position:
−
** 33.818527    
+
** 1.6473727    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.4.17-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3-ISOPROPYLMALISOM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN]]
+
* [[HOMOACONITATE-HYDRATASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[IMDHT_LPAREN_3c2hmp_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[R-2-METHYLMALATE-DEHYDRATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13163]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13722]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8991]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[LEUSYN-PWY]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6871]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[LYSINE-AMINOAD-PWY]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[P241-PWY]]
 +
** '''1''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-3081]]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5101]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7698]]
 +
** '''1''' reactions found over '''13''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=88546}}
+
{{#set: right-end-position=34418}}
−
{{#set: left-end-position=80853}}
+
{{#set: left-end-position=6694}}
−
{{#set: centisome-position=33.818527   }}
+
{{#set: centisome-position=1.6473727   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=7}}

Revision as of 15:18, 5 January 2021

Gene SJ09771

  • transcription-direction:
    • negative
  • right-end-position:
    • 34418
  • left-end-position:
    • 6694
  • centisome-position:
    • 1.6473727

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LEUSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6871
    • 5 reactions found over 7 reactions in the full pathway
  • LYSINE-AMINOAD-PWY
    • 1 reactions found over 9 reactions in the full pathway
  • P241-PWY
    • 1 reactions found over 16 reactions in the full pathway
  • PWY-3081
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7698
    • 1 reactions found over 13 reactions in the full pathway




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