Difference between revisions of "SJ08690"

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(Created page with "Category:gene == Gene SJ11623 == * transcription-direction: ** negative * right-end-position: ** 351585 * left-end-position: ** 341890 * centisome-position: ** 43.8672...")
(Created page with "Category:gene == Gene SJ19601 == * transcription-direction: ** positive * right-end-position: ** 90128 * left-end-position: ** 84657 * centisome-position: ** 37.73098...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11623 ==
+
== Gene SJ19601 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 351585
+
** 90128
 
* left-end-position:
 
* left-end-position:
−
** 341890
+
** 84657
 
* centisome-position:
 
* centisome-position:
−
** 43.8672    
+
** 37.73098    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DHFOR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DHFR2i]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DHFRi]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DIHYDROFOLATEREDUCT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[FOLR2]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[MDUMT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[THFOR1]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[THFOR2]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[THYMIDYLATESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
</div>
−
{{#set: right-end-position=351585}}
+
== Pathway(s) associated ==
−
{{#set: left-end-position=341890}}
+
* [[1CMET2-PWY]]
−
{{#set: centisome-position=43.8672   }}
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3841]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6614]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7187]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7199]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY0-166]]
 +
** '''14''' reactions found over '''13''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=90128}}
 +
{{#set: left-end-position=84657}}
 +
{{#set: centisome-position=37.73098   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=9}}

Revision as of 09:25, 27 August 2019

Gene SJ19601

  • transcription-direction:
    • positive
  • right-end-position:
    • 90128
  • left-end-position:
    • 84657
  • centisome-position:
    • 37.73098

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-6614
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7199
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway




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