Difference between revisions of "SJ17385"

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(Created page with "Category:gene == Gene SJ02113 == * transcription-direction: ** negative * right-end-position: ** 168268 * left-end-position: ** 157823 * centisome-position: ** 29.03747...")
(Created page with "Category:gene == Gene SJ17385 == * transcription-direction: ** positive * right-end-position: ** 251506 * left-end-position: ** 237403 * centisome-position: ** 69.50184...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02113 ==
+
== Gene SJ17385 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 168268
+
** 251506
 
* left-end-position:
 
* left-end-position:
−
** 157823
+
** 237403
 
* centisome-position:
 
* centisome-position:
−
** 29.03747    
+
** 69.50184    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.2.1.6-RXN]]
+
* [[DIHYDROFOLATEREDUCT-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=168268}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=157823}}
+
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
−
{{#set: centisome-position=29.03747   }}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[MTHFCx]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1CMET2-PWY]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3841]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6614]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[P164-PWY]]
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[CODH-PWY]]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5030]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7909]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-2201]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6613]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-1722]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=251506}}
 +
{{#set: left-end-position=237403}}
 +
{{#set: centisome-position=69.50184   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=11}}

Latest revision as of 11:04, 18 March 2021

Gene SJ17385

  • transcription-direction:
    • positive
  • right-end-position:
    • 251506
  • left-end-position:
    • 237403
  • centisome-position:
    • 69.50184

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-6614
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 15 reactions in the full pathway
  • CODH-PWY
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-5030
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7909
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-6613
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-1722
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17385&oldid=133546"