Difference between revisions of "SJ17788"

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(Created page with "Category:gene == Gene SJ21393 == * transcription-direction: ** positive * right-end-position: ** 172389 * left-end-position: ** 149541 * centisome-position: ** 77.12592...")
(Created page with "Category:gene == Gene SJ19601 == * transcription-direction: ** positive * right-end-position: ** 90128 * left-end-position: ** 84657 * centisome-position: ** 37.73098...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21393 ==
+
== Gene SJ19601 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 172389
+
** 90128
 
* left-end-position:
 
* left-end-position:
−
** 149541
+
** 84657
 
* centisome-position:
 
* centisome-position:
−
** 77.12592    
+
** 37.73098    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DHFOR]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DHFR2i]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DHFRi]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[DIHYDROFOLATEREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[FOLR2]]
−
* [[RXN-11109]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[MDUMT]]
−
* [[RXN-12195]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[THFOR1]]
−
* [[RXN-12196]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[THFOR2]]
−
* [[RXN0-5462]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[THYMIDYLATESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[1CMET2-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-3841]]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6614]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7187]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7199]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7198]]
 
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7184]]
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7210]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY0-166]]
 +
** '''14''' reactions found over '''13''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=172389}}
+
{{#set: right-end-position=90128}}
−
{{#set: left-end-position=149541}}
+
{{#set: left-end-position=84657}}
−
{{#set: centisome-position=77.12592   }}
+
{{#set: centisome-position=37.73098   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=9}}

Revision as of 18:51, 14 January 2021

Gene SJ19601

  • transcription-direction:
    • positive
  • right-end-position:
    • 90128
  • left-end-position:
    • 84657
  • centisome-position:
    • 37.73098

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-6614
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7187
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7199
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY0-166
    • 14 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17788&oldid=96958"